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GLUr5mumu  mouse glutamate receptor GLUR5 subunit (aka Grik1, kainate 1)

Organism Mus musculus
Date of entry creation: 2007-04-23T18:00:23 Date of last modification: 2007-06-05T16:19:19
Locus Chr 16 C3.3
  • Gregor P., O'Hara B.F., Yang X., Uhl G.R.; "Expression and novel subunit isoforms of glutamate receptor genes GluR5 and GluR6."; NeuroReport 4:1343-1346(1993).
  • Herb A., Higuchi M., Sprengel R., Seeburg P.H.; "Q/R site editing in kainate receptor GluR5 and GluR6 pre-mRNAs requires distant intronic sequences."; Proc. Natl. Acad. Sci. U.S.A. 93:1875-1880(1996).
  • Sommer B., Koehler M., Sprengel R., Seeburg P.H.; "RNA editing in brain controls a determinant of ion flow in glutamate-gated channels."; Cell 67:11-19(1991).
  • Jaskolski F., Coussen F., Nagarajan N., Normand E., Rosenmund C., Mulle C.; "Subunit composition and alternative splicing regulate membrane delivery of kainate receptors." J. Neurosci. 24 (10), 2506-2515 (2004).
General notes

Q/R RNA edited site at 639 (in these sequences as R). Ensembl sequences have an SA insertion (not included here) at site 369. Other splice isoforms may exist. (See SwissProt Q60934.)

Sequences
genomic
Accession codes for other databases Ensembl: ENSMUSG00000022935
FASTA: GLUr5mumu.gfa EMBL: GLUr5mumu.gem Genbank: GLUr5mumu.ggb
transcript Note: Shorter of two transcripts in Ensembl.
Accession codes for other databases Ensembl: ENSMUST00000023652
FASTA: GLUr5mumu-2.cfa EMBL: GLUr5mumu-2.cem Genbank: GLUr5mumu-2.cgb
transcript Note: Longer of two transcripts in Ensembl.
Accession codes for other databases Ensembl: ENSMUST00000072256
FASTA: GLUr5mumu-1.cfa EMBL: GLUr5mumu-1.cem Genbank: GLUr5mumu-1.cgb
protein Note: Second longest Cterm splice isoform (2b). See Jaskolski et al. (2004) and notes above.
Accession codes for other databases Ensembl: ENSMUSP00000023652
SPTREMBL: Q3UZT1
FASTA: GLUr5mumu-2.pfa EMBL: GLUr5mumu-2.pem Genbank: GLUr5mumu-2.pgb
protein Note: Longest Cterm splice isoform (2c). See Jaskolski et al. (2004) and notes above.
Accession codes for other databases Ensembl: ENSMUSP00000072107
SPTREMBL: Q8BRT2
FASTA: GLUr5mumu-1.pfa EMBL: GLUr5mumu-1.pem Genbank: GLUr5mumu-1.pgb
protein Note: Based on UniProt Q3UZT1. Short Cterm splice isoform (2a). See Jaskolski et al. (2004) and notes above.
FASTA: GLUr5mumu-3.pfa EMBL: GLUr5mumu-3.pem Genbank: GLUr5mumu-3.pgb
Structures
Miscellanea
Phylogenetic analyses
All the information under the LGICdb format (the file is unparsable by HTML browsers. You can visualize it with the "View Source" tool of your browser.)

  Citation

Nicolas Le Novère and Jean-Pierre Changeux (1999). The Ligand-Gated Ion Channel database. Nucleic Acid Research, 27 : 340-342
( PDF version)

Last modification: Mon Jun 25 12:44:01 2007 GMT | Nicolas Le Novère

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